- Berrocal-Tito, G. M., T. Rosales-Saavedra, A. Herrera-Estrella, and B. A. Horwitz. 2000. Characterization of blue-light and developmental regulation of the photolyase gene phr1 in Trichoderma harzianum. Photochem Photobiol 71:662-8.
- Lev, S., and B. A. Horwitz. 2003. A mitogen-activated protein kinase pathway modulates the expression of two cellulase genes in Cochliobolus heterostrophus during plant infection. The Plant Cell 15:835-44.
- Mukherjee, P. K., J. Latha, R. Hadar, and B. A. Horwitz. 2003. TmkA, a MAP kinase of Trichoderma virens, is involved in biocontrol properties and repression of conidiation in the dark. Eukaryot Cell 2:446-455.
- Lev, S., R. Hadar, P. Amedeo, S. E. Baker, O. C. Yoder, and B. A. Horwitz. 2005. Activation of an AP1-like transcription factor of the maize pathogen Cochliobolus heterostrophus in response to oxidative stress and plant signals. Eukaryotic Cell 4: 443-54.
- Igbaria, A., Lev, S., Rose, M.S., Lee, B.N., Hadar, R., Degani, O. and B.A. Horwitz. 2008. The MAP kinase signaling network of Cochliobolus heterostrophus: modulation of gene expression and role in virulence and stress responses. MPMI 21:769-80.
- Shanmugam V, Ronen M, Shalaby S, Larkov O, Rachamim Y, Hadar R, Rose MS, Carmeli S, Horwitz BA, Lev S. The fungal pathogen Cochliobolus heterostrophus responds to maize phenolics: novel small molecule signals in a plant-fungal interaction. Cell Microbiol. 2010 12:1421-34
- Ohm RA et al. 2012. Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi.
- PLoS Pathogens 8(12): e1003037.
- Morán-Diez E, Trushina N, Lamdan NL, Rosenfelder L, Mukherjee, PK, Kenerley, CM and Horwitz BA. 2015. Host-specific transcriptomic pattern of Trichoderma virens during interaction with maize or tomato roots. BMC Genomics 16:8
- Lamdan NL, Shalaby S, Ziv T, Kenerley CM, Horwitz BA. 2015. Secretome of Trichoderma interacting with maize roots: role in induced systemic resistance. Mol Cell Proteomics 14:1054-63